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Do the following steps:
– Record a Quick Macro.
– Select your object.
– Create interactively a diagram.
– Stop Macro Recording.
– Open the VBA editor (ALT+F11; FlexPro Professional)

You see the code in Template.FPT. Now you can edit this code.

Example:

    Dim NameArray
    NameArray = Array("Signal", "Signal2")
    With ActiveDatabase.RootFolder.Add("2D-Diagram", fpObjectType2DDiagram)
        With .Curves.Add
            .Data.DataSet = NameArray(0)
        End With
        With .Curves.Add
            .Data.DataSet = NameArray(1)
        End With
        .Update
    End With

See also
FlexPro Online Help
Creating a Macro

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